Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 UNC93B6-202ENST00000528242 690 ntBASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 MIR4515-201ENST00000584082 81 ntBASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 SLC25A6P4-201ENST00000586535 553 ntBASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
LRRC40Q9H9A6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 VN2R19P-201ENST00000442399 1052 ntBASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 AC009947.1-201ENST00000444350 727 ntBASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 PCGF3-213ENST00000620529 1899 ntBASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRC40Q9H9A6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms