Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 AP001094.4-201ENST00000579008 2176 ntBASIC19.29■□□□□ 0.68
SH2D4AQ9H788 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 AD000864.1-201ENST00000624076 2295 ntBASIC19.29■□□□□ 0.68
SH2D4AQ9H788 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 AC098859.1-201ENST00000502915 1238 ntBASIC19.29■□□□□ 0.68
SH2D4AQ9H788 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 AC073592.8-201ENST00000624126 511 ntBASIC19.29■□□□□ 0.68
SH2D4AQ9H788 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 AL035456.1-201ENST00000456064 1369 ntBASIC19.29■□□□□ 0.68
SH2D4AQ9H788 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 FOXO1B-201ENST00000504678 1527 ntBASIC19.28■□□□□ 0.68
SH2D4AQ9H788 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 AC022211.2-201ENST00000585075 2527 ntBASIC19.28■□□□□ 0.68
SH2D4AQ9H788 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.28■□□□□ 0.68
SH2D4AQ9H788 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 AC241585.1-201ENST00000433527 519 ntBASIC19.27■□□□□ 0.68
SH2D4AQ9H788 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 AC138761.1-201ENST00000584393 385 ntBASIC19.27■□□□□ 0.68
SH2D4AQ9H788 AC020765.3-201ENST00000613051 740 ntBASIC19.27■□□□□ 0.68
SH2D4AQ9H788 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D4AQ9H788 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms