Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 AC112482.1-201ENST00000492080 688 ntBASIC15.41■□□□□ 0.06
UBQLN3Q9H347 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 CICP6-201ENST00000457191 2729 ntBASIC15.4■□□□□ 0.06
UBQLN3Q9H347 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 AC092364.2-201ENST00000596710 2692 ntBASIC15.4■□□□□ 0.06
UBQLN3Q9H347 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN3Q9H347 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 AC074386.1-202ENST00000463561 864 ntBASIC15.39■□□□□ 0.05
UBQLN3Q9H347 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 MIR3687-2-201ENST00000577708 61 ntBASIC15.39■□□□□ 0.05
UBQLN3Q9H347 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.39■□□□□ 0.05
UBQLN3Q9H347 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms