Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 AC074044.1-201ENST00000609673 707 ntBASIC21.29■■□□□ 1
PCDH11XQ9BZA7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 TMEM14DP-201ENST00000422205 345 ntBASIC21.29■■□□□ 1
PCDH11XQ9BZA7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.29■■□□□ 1
PCDH11XQ9BZA7 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.29■■□□□ 1
PCDH11XQ9BZA7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 AC022210.1-201ENST00000449856 793 ntBASIC21.28■■□□□ 1
PCDH11XQ9BZA7 AC022494.1-201ENST00000466044 728 ntBASIC21.28■■□□□ 1
PCDH11XQ9BZA7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 AC025048.3-201ENST00000590609 569 ntBASIC21.28■■□□□ 1
PCDH11XQ9BZA7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.28■■□□□ 1
PCDH11XQ9BZA7 AC005702.4-201ENST00000618393 416 ntBASIC21.28■■□□□ 1
PCDH11XQ9BZA7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PCDH11XQ9BZA7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH11XQ9BZA7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.27■□□□□ 0.99
PCDH11XQ9BZA7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH11XQ9BZA7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH11XQ9BZA7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH11XQ9BZA7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.27■□□□□ 0.99
PCDH11XQ9BZA7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC21.27■□□□□ 0.99
PCDH11XQ9BZA7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.27■□□□□ 0.99
PCDH11XQ9BZA7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC21.27■□□□□ 0.99
PCDH11XQ9BZA7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
PCDH11XQ9BZA7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms