Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 AC100803.2-201ENST00000562459 1963 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 RPL17P11-201ENST00000417593 544 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 TMEM198B-204ENST00000484016 896 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 ZNF890P-202ENST00000530367 1156 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 TPRX2P-201ENST00000535362 881 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 AC010319.3-201ENST00000597028 470 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 AC233724.13-201ENST00000598383 410 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 AC091271.1-201ENST00000611877 1162 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 ABALON-201ENST00000629058 1903 ntBASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNTNAP3Q9BZ76 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 EIF4HP1-201ENST00000453115 687 ntBASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 SDHAP3-202ENST00000515467 728 ntBASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 AC067852.2-201ENST00000590513 2313 ntBASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNTNAP3Q9BZ76 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms