Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AL450487.1-201ENST00000426799 995 ntBASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 KRT18P65-201ENST00000439811 1286 ntBASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 DDX43P3-201ENST00000441064 443 ntBASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 PRELID1P1-202ENST00000567272 903 ntBASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 MIR3652-201ENST00000579335 131 ntBASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 CLEC4GP1-201ENST00000596555 870 ntBASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AC092119.3-201ENST00000612618 583 ntBASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 MIR662-201ENST00000384847 95 ntBASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 TSPY22P-201ENST00000427496 604 ntBASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 LINC01451-201ENST00000623792 534 ntBASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 AC079602.3-201ENST00000623931 403 ntBASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 AC007292.2-201ENST00000593524 1812 ntBASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms