Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL13Q99616 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL13Q99616 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL13Q99616 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
CCL13Q99616 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL13Q99616 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL13Q99616 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 PCDHA14-201ENST00000506751 2298 ntBASIC13.92□□□□□ -0.18
CCL13Q99616 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 BX842568.4-201ENST00000421222 227 ntBASIC13.92□□□□□ -0.18
CCL13Q99616 MCCD1P2-201ENST00000423228 335 ntBASIC13.92□□□□□ -0.18
CCL13Q99616 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 FAM58CP-201ENST00000435741 640 ntBASIC13.92□□□□□ -0.18
CCL13Q99616 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 HLA-J-202ENST00000469281 1241 ntBASIC13.92□□□□□ -0.18
CCL13Q99616 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.92□□□□□ -0.18
CCL13Q99616 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.92□□□□□ -0.18
CCL13Q99616 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.92□□□□□ -0.18
CCL13Q99616 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL13Q99616 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCL13Q99616 AL009183.1-201ENST00000603760 355 ntBASIC13.92□□□□□ -0.18
CCL13Q99616 AL078644.1-201ENST00000609881 752 ntBASIC13.92□□□□□ -0.18
CCL13Q99616 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL13Q99616 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.92□□□□□ -0.18
CCL13Q99616 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CCL13Q99616 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL13Q99616 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL13Q99616 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL13Q99616 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CCL13Q99616 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL13Q99616 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CCL13Q99616 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CCL13Q99616 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CCL13Q99616 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.91□□□□□ -0.18
CCL13Q99616 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CCL13Q99616 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 AC002056.1-201ENST00000395613 760 ntBASIC13.91□□□□□ -0.18
CCL13Q99616 PMS2P4-201ENST00000412466 1052 ntBASIC13.91□□□□□ -0.18
CCL13Q99616 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL13Q99616 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 AC112191.1-201ENST00000523689 701 ntBASIC13.91□□□□□ -0.18
CCL13Q99616 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 AC021097.1-201ENST00000607902 574 ntBASIC13.91□□□□□ -0.18
CCL13Q99616 AC091812.2-201ENST00000619081 385 ntBASIC13.91□□□□□ -0.18
CCL13Q99616 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CCL13Q99616 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CCL13Q99616 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CCL13Q99616 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CCL13Q99616 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL13Q99616 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL13Q99616 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CCL13Q99616 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms