Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 AC005229.1-201ENST00000392885 409 ntBASIC16.79■□□□□ 0.28
PHOX2BQ99453 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 RARRES2P9-201ENST00000565168 469 ntBASIC16.79■□□□□ 0.28
PHOX2BQ99453 AL138918.1-201ENST00000568306 659 ntBASIC16.79■□□□□ 0.28
PHOX2BQ99453 CTBP2P3-201ENST00000585629 1255 ntBASIC16.79■□□□□ 0.28
PHOX2BQ99453 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.79■□□□□ 0.28
PHOX2BQ99453 PCDHA12-202ENST00000613593 2588 ntBASIC16.79■□□□□ 0.28
PHOX2BQ99453 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHOX2BQ99453 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 RPL37AP1-201ENST00000412502 279 ntBASIC16.78■□□□□ 0.28
PHOX2BQ99453 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 AL355994.2-201ENST00000447882 704 ntBASIC16.78■□□□□ 0.28
PHOX2BQ99453 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 ZNF767P-206ENST00000513792 565 ntBASIC16.78■□□□□ 0.28
PHOX2BQ99453 DOC2GP-202ENST00000514950 1163 ntBASIC16.78■□□□□ 0.28
PHOX2BQ99453 IGHV3-52-201ENST00000519770 353 ntBASIC16.78■□□□□ 0.28
PHOX2BQ99453 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHOX2BQ99453 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
PHOX2BQ99453 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 AP3S2-216ENST00000617003 1561 ntBASIC16.77■□□□□ 0.28
PHOX2BQ99453 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHOX2BQ99453 AC084018.2-201ENST00000613093 2607 ntBASIC16.77■□□□□ 0.28
PHOX2BQ99453 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHOX2BQ99453 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHOX2BQ99453 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHOX2BQ99453 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHOX2BQ99453 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PHOX2BQ99453 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHOX2BQ99453 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PHOX2BQ99453 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PHOX2BQ99453 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PHOX2BQ99453 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHOX2BQ99453 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms