Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 BTBD7P1-201ENST00000447253 1453 ntBASIC19.27■□□□□ 0.68
CDK5RAP2Q96SN8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDK5RAP2Q96SN8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.27■□□□□ 0.67
CDK5RAP2Q96SN8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDK5RAP2Q96SN8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDK5RAP2Q96SN8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDK5RAP2Q96SN8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 MEIS3P1-201ENST00000495167 958 ntBASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 AC007431.3-201ENST00000623221 587 ntBASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 AGGF1P2-201ENST00000426656 2106 ntBASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 AC092337.1-201ENST00000568699 1129 ntBASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP2Q96SN8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 LINC01115-203ENST00000606068 577 ntBASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP2Q96SN8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 REXO1L8P-201ENST00000604378 1897 ntBASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 AL589987.1-201ENST00000453380 819 ntBASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 AC135586.1-201ENST00000539323 574 ntBASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP2Q96SN8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms