Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 RN7SL606P-201ENST00000472779 293 ntBASIC13.54□□□□□ -0.24
RAB40CQ96S21 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 LINC01238-205ENST00000567549 1107 ntBASIC13.54□□□□□ -0.24
RAB40CQ96S21 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 AC097637.2-201ENST00000624096 1997 ntBASIC13.54□□□□□ -0.24
RAB40CQ96S21 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 AC006058.4-201ENST00000624016 1670 ntBASIC13.53□□□□□ -0.24
RAB40CQ96S21 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 AC092850.2-201ENST00000623821 2697 ntBASIC13.53□□□□□ -0.24
RAB40CQ96S21 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 SIGLEC30P-201ENST00000455569 941 ntBASIC13.53□□□□□ -0.24
RAB40CQ96S21 DUX4L26-201ENST00000489078 1255 ntBASIC13.53□□□□□ -0.24
RAB40CQ96S21 AC063952.2-201ENST00000498792 1227 ntBASIC13.53□□□□□ -0.24
RAB40CQ96S21 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.53□□□□□ -0.24
RAB40CQ96S21 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.53□□□□□ -0.24
RAB40CQ96S21 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40CQ96S21 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40CQ96S21 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40CQ96S21 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.52□□□□□ -0.24
RAB40CQ96S21 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40CQ96S21 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40CQ96S21 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
RAB40CQ96S21 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40CQ96S21 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms