Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 AC233724.13-201ENST00000598383 410 ntBASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 AL118558.3-201ENST00000607414 1079 ntBASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CSMD1Q96PZ7 AC026471.1-201ENST00000564629 3026 ntBASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 KRT43P-201ENST00000434019 910 ntBASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CSMD1Q96PZ7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 MSTO2P-201ENST00000314835 1709 ntBASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 MIR5189-201ENST00000577370 114 ntBASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 AL365330.1-201ENST00000607459 531 ntBASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 AC007969.1-201ENST00000433675 447 ntBASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CSMD1Q96PZ7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms