Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
SHDQ96IW2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHDQ96IW2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SHDQ96IW2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SHDQ96IW2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.62■□□□□ 0.25
SHDQ96IW2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.62■□□□□ 0.25
SHDQ96IW2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SHDQ96IW2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.62■□□□□ 0.25
SHDQ96IW2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.62■□□□□ 0.25
SHDQ96IW2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SHDQ96IW2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.62■□□□□ 0.25
SHDQ96IW2 AL139010.1-201ENST00000454878 894 ntBASIC16.62■□□□□ 0.25
SHDQ96IW2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SHDQ96IW2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 AC119751.2-201ENST00000504529 210 ntBASIC16.62■□□□□ 0.25
SHDQ96IW2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.62■□□□□ 0.25
SHDQ96IW2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.62■□□□□ 0.25
SHDQ96IW2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.62■□□□□ 0.25
SHDQ96IW2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.62■□□□□ 0.25
SHDQ96IW2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.62■□□□□ 0.25
SHDQ96IW2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SHDQ96IW2 WFDC1-204ENST00000613603 549 ntBASIC16.62■□□□□ 0.25
SHDQ96IW2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.62■□□□□ 0.25
SHDQ96IW2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.62■□□□□ 0.25
SHDQ96IW2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SHDQ96IW2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 BICD1-207ENST00000551848 1962 ntBASIC16.62■□□□□ 0.25
SHDQ96IW2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHDQ96IW2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.61■□□□□ 0.25
SHDQ96IW2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHDQ96IW2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.61■□□□□ 0.25
SHDQ96IW2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SHDQ96IW2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
SHDQ96IW2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 TMEM14DP-201ENST00000422205 345 ntBASIC16.61■□□□□ 0.25
SHDQ96IW2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.61■□□□□ 0.25
SHDQ96IW2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
SHDQ96IW2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
SHDQ96IW2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.61■□□□□ 0.25
SHDQ96IW2 AC092337.1-201ENST00000568699 1129 ntBASIC16.61■□□□□ 0.25
SHDQ96IW2 AC061975.2-201ENST00000581722 295 ntBASIC16.61■□□□□ 0.25
SHDQ96IW2 AC008735.3-201ENST00000596646 500 ntBASIC16.61■□□□□ 0.25
SHDQ96IW2 AC020765.3-201ENST00000613051 740 ntBASIC16.61■□□□□ 0.25
SHDQ96IW2 MIR8072-201ENST00000614241 80 ntBASIC16.61■□□□□ 0.25
SHDQ96IW2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.61■□□□□ 0.25
SHDQ96IW2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.61■□□□□ 0.25
SHDQ96IW2 AC009113.1-201ENST00000570267 2443 ntBASIC16.61■□□□□ 0.25
SHDQ96IW2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.61■□□□□ 0.25
SHDQ96IW2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.61■□□□□ 0.25
SHDQ96IW2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHDQ96IW2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.61■□□□□ 0.25
SHDQ96IW2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.61■□□□□ 0.25
SHDQ96IW2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHDQ96IW2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHDQ96IW2 AL589702.1-201ENST00000641229 1509 ntBASIC16.6■□□□□ 0.25
SHDQ96IW2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.6■□□□□ 0.25
SHDQ96IW2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.6■□□□□ 0.25
SHDQ96IW2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SHDQ96IW2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.6■□□□□ 0.25
SHDQ96IW2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.6■□□□□ 0.25
SHDQ96IW2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.6■□□□□ 0.25
SHDQ96IW2 AC093724.1-201ENST00000448659 1027 ntBASIC16.6■□□□□ 0.25
SHDQ96IW2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SHDQ96IW2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms