Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRCH3Q96II8 AL353732.1-201ENST00000569618 1459 ntBASIC17.89■□□□□ 0.45
LRCH3Q96II8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH3Q96II8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRCH3Q96II8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH3Q96II8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.89■□□□□ 0.45
LRCH3Q96II8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.89■□□□□ 0.45
LRCH3Q96II8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH3Q96II8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH3Q96II8 HINT2P1-201ENST00000419438 481 ntBASIC17.89■□□□□ 0.45
LRCH3Q96II8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.89■□□□□ 0.45
LRCH3Q96II8 FO681548.1-201ENST00000455617 1132 ntBASIC17.89■□□□□ 0.45
LRCH3Q96II8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRCH3Q96II8 MIR4706-201ENST00000582134 82 ntBASIC17.89■□□□□ 0.45
LRCH3Q96II8 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.89■□□□□ 0.45
LRCH3Q96II8 AL365330.1-201ENST00000607459 531 ntBASIC17.89■□□□□ 0.45
LRCH3Q96II8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.89■□□□□ 0.45
LRCH3Q96II8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH3Q96II8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH3Q96II8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.89■□□□□ 0.45
LRCH3Q96II8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH3Q96II8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 AC017007.3-201ENST00000479865 435 ntBASIC17.88■□□□□ 0.45
LRCH3Q96II8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 RN7SL602P-201ENST00000578326 324 ntBASIC17.88■□□□□ 0.45
LRCH3Q96II8 MIR3909-201ENST00000579518 119 ntBASIC17.88■□□□□ 0.45
LRCH3Q96II8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 AL118558.3-201ENST00000607414 1079 ntBASIC17.88■□□□□ 0.45
LRCH3Q96II8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.88■□□□□ 0.45
LRCH3Q96II8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.88■□□□□ 0.45
LRCH3Q96II8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH3Q96II8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.88■□□□□ 0.45
LRCH3Q96II8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH3Q96II8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH3Q96II8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH3Q96II8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH3Q96II8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH3Q96II8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH3Q96II8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 MIR5572-201ENST00000583188 137 ntBASIC17.87■□□□□ 0.45
LRCH3Q96II8 MIR8072-201ENST00000614241 80 ntBASIC17.87■□□□□ 0.45
LRCH3Q96II8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH3Q96II8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH3Q96II8 AC012313.1-201ENST00000593393 3059 ntBASIC17.87■□□□□ 0.45
LRCH3Q96II8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH3Q96II8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH3Q96II8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
LRCH3Q96II8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 CDC14C-201ENST00000428251 1719 ntBASIC17.86■□□□□ 0.45
LRCH3Q96II8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 AC138932.1-201ENST00000534164 6830 ntBASIC17.86■□□□□ 0.45
LRCH3Q96II8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms