Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 ACTL9-202ENST00000612068 1252 ntBASIC17.58■□□□□ 0.4
TRIM11Q96F44 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM11Q96F44 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM11Q96F44 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 AC092910.1-201ENST00000482027 1129 ntBASIC17.57■□□□□ 0.4
TRIM11Q96F44 CXCL1P1-201ENST00000502804 216 ntBASIC17.57■□□□□ 0.4
TRIM11Q96F44 AC093909.1-201ENST00000504731 1122 ntBASIC17.57■□□□□ 0.4
TRIM11Q96F44 AP002469.2-201ENST00000531724 424 ntBASIC17.57■□□□□ 0.4
TRIM11Q96F44 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 MIR3909-201ENST00000579518 119 ntBASIC17.57■□□□□ 0.4
TRIM11Q96F44 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 AC021097.1-201ENST00000607902 574 ntBASIC17.57■□□□□ 0.4
TRIM11Q96F44 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 AL031008.1-201ENST00000619963 541 ntBASIC17.57■□□□□ 0.4
TRIM11Q96F44 AL645728.2-201ENST00000641974 660 ntBASIC17.57■□□□□ 0.4
TRIM11Q96F44 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 AC006449.6-201ENST00000612330 2296 ntBASIC17.57■□□□□ 0.4
TRIM11Q96F44 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 AC022188.1-201ENST00000620960 1664 ntBASIC17.57■□□□□ 0.4
TRIM11Q96F44 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM11Q96F44 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM11Q96F44 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 AL031284.1-201ENST00000419297 478 ntBASIC17.56■□□□□ 0.4
TRIM11Q96F44 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 PCDH8P1-201ENST00000428983 2773 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms