Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM54Q969K7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 AP000347.1-202ENST00000435868 847 ntBASIC14.6□□□□□ -0.07
TMEM54Q969K7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM54Q969K7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.6□□□□□ -0.07
TMEM54Q969K7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 AC002347.1-201ENST00000569543 541 ntBASIC14.6□□□□□ -0.07
TMEM54Q969K7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 AC092364.2-201ENST00000596710 2692 ntBASIC14.6□□□□□ -0.07
TMEM54Q969K7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM54Q969K7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM54Q969K7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM54Q969K7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
TMEM54Q969K7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM54Q969K7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TMEM54Q969K7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM54Q969K7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 WASH6P-202ENST00000359512 1437 ntBASIC14.59□□□□□ -0.07
TMEM54Q969K7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 AL662844.4-201ENST00000606367 2838 ntBASIC14.59□□□□□ -0.07
TMEM54Q969K7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 AC005622.1-201ENST00000636801 1703 ntBASIC14.59□□□□□ -0.07
TMEM54Q969K7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 MCCD1P2-201ENST00000423228 335 ntBASIC14.59□□□□□ -0.07
TMEM54Q969K7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 AC099522.2-201ENST00000607001 744 ntBASIC14.59□□□□□ -0.07
TMEM54Q969K7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM54Q969K7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TMEM54Q969K7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM54Q969K7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM54Q969K7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.58□□□□□ -0.07
TMEM54Q969K7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.58□□□□□ -0.07
TMEM54Q969K7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM54Q969K7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM54Q969K7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.58□□□□□ -0.07
TMEM54Q969K7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
TMEM54Q969K7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.58□□□□□ -0.07
TMEM54Q969K7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TMEM54Q969K7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM54Q969K7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM54Q969K7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM54Q969K7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM54Q969K7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM54Q969K7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM54Q969K7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM54Q969K7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 PMS2P7-201ENST00000506558 1336 ntBASIC14.58□□□□□ -0.08
TMEM54Q969K7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM54Q969K7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
TMEM54Q969K7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms