Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.4■□□□□ 0.54
HPS3Q969F9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.4■□□□□ 0.54
HPS3Q969F9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.4■□□□□ 0.54
HPS3Q969F9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.4■□□□□ 0.54
HPS3Q969F9 KRT19P2-202ENST00000557173 1012 ntBASIC18.4■□□□□ 0.54
HPS3Q969F9 AL031432.2-201ENST00000566714 459 ntBASIC18.4■□□□□ 0.54
HPS3Q969F9 AL928711.1-201ENST00000570165 459 ntBASIC18.4■□□□□ 0.54
HPS3Q969F9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 AL031055.1-201ENST00000606362 631 ntBASIC18.4■□□□□ 0.54
HPS3Q969F9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.4■□□□□ 0.54
HPS3Q969F9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HPS3Q969F9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS3Q969F9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS3Q969F9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HPS3Q969F9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.39■□□□□ 0.54
HPS3Q969F9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HPS3Q969F9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HPS3Q969F9 PCGF3-213ENST00000620529 1899 ntBASIC18.39■□□□□ 0.54
HPS3Q969F9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
HPS3Q969F9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.39■□□□□ 0.54
HPS3Q969F9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.39■□□□□ 0.53
HPS3Q969F9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.39■□□□□ 0.53
HPS3Q969F9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 MIR940-201ENST00000401276 94 ntBASIC18.39■□□□□ 0.53
HPS3Q969F9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.39■□□□□ 0.53
HPS3Q969F9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.39■□□□□ 0.53
HPS3Q969F9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.39■□□□□ 0.53
HPS3Q969F9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.39■□□□□ 0.53
HPS3Q969F9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.39■□□□□ 0.53
HPS3Q969F9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HPS3Q969F9 AL645728.2-201ENST00000641974 660 ntBASIC18.39■□□□□ 0.53
HPS3Q969F9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HPS3Q969F9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.39■□□□□ 0.53
HPS3Q969F9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HPS3Q969F9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
HPS3Q969F9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HPS3Q969F9 CYP2T1P-202ENST00000641596 2535 ntBASIC18.39■□□□□ 0.53
HPS3Q969F9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 AC026691.1-201ENST00000602502 2017 ntBASIC18.39■□□□□ 0.53
HPS3Q969F9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS3Q969F9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS3Q969F9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.38■□□□□ 0.53
HPS3Q969F9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS3Q969F9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.38■□□□□ 0.53
HPS3Q969F9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS3Q969F9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS3Q969F9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HPS3Q969F9 OR6D1P-203ENST00000641209 4860 ntBASIC18.38■□□□□ 0.53
HPS3Q969F9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS3Q969F9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.38■□□□□ 0.53
HPS3Q969F9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS3Q969F9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.38■□□□□ 0.53
HPS3Q969F9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS3Q969F9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS3Q969F9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS3Q969F9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.38■□□□□ 0.53
HPS3Q969F9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HPS3Q969F9 AP000347.1-202ENST00000435868 847 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms