Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 AL603832.2-201ENST00000566195 2125 ntBASIC17.74■□□□□ 0.43
LMO3Q8TAP4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 AC023274.1-201ENST00000418278 595 ntBASIC17.73■□□□□ 0.43
LMO3Q8TAP4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMO3Q8TAP4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 AC024909.3-201ENST00000611513 2257 ntBASIC17.72■□□□□ 0.43
LMO3Q8TAP4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 AL365203.3-201ENST00000609742 2057 ntBASIC17.72■□□□□ 0.43
LMO3Q8TAP4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 AL022342.1-201ENST00000400363 863 ntBASIC17.72■□□□□ 0.43
LMO3Q8TAP4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 AP000347.1-202ENST00000435868 847 ntBASIC17.72■□□□□ 0.43
LMO3Q8TAP4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
LMO3Q8TAP4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 AC073439.1-201ENST00000624121 1774 ntBASIC17.71■□□□□ 0.43
LMO3Q8TAP4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 KRT18P34-201ENST00000488218 1270 ntBASIC17.71■□□□□ 0.43
LMO3Q8TAP4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMO3Q8TAP4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms