Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 NANOGP1-202ENST00000607111 1982 ntTSL 5 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 ABLIM3-205ENST00000504238 2774 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 RCAN1-207ENST00000481448 2816 ntTSL 5 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 TCF7-202ENST00000378560 2929 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 AL512791.2-201ENST00000615251 4609 ntBASIC10.23□□□□□ -0.77
SVIPQ8NHG7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.23□□□□□ -0.77
SVIPQ8NHG7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 PLEKHG3-204ENST00000484731 3001 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 ZC4H2-203ENST00000447788 2649 ntTSL 2 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 AC072061.1-201ENST00000569710 2234 ntBASIC10.23□□□□□ -0.77
SVIPQ8NHG7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 DGKZP1-201ENST00000378718 2776 ntBASIC10.23□□□□□ -0.77
SVIPQ8NHG7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 ANKRD62-202ENST00000587848 2919 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 RAPGEF3-202ENST00000395358 4092 ntTSL 2 BASIC10.23□□□□□ -0.77
SVIPQ8NHG7 AC009163.7-201ENST00000621929 2557 ntBASIC10.22□□□□□ -0.77
SVIPQ8NHG7 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 PRSS54-202ENST00000543437 1555 ntTSL 2 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 TIPIN-201ENST00000261881 1744 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 PCGF3-213ENST00000620529 1899 ntBASIC10.22□□□□□ -0.77
SVIPQ8NHG7 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 CACNA2D4-219ENST00000585708 3273 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 BDKRB2-203ENST00000554311 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 ASB15-201ENST00000275699 2706 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 AC091152.4-201ENST00000623480 3483 ntBASIC10.22□□□□□ -0.77
SVIPQ8NHG7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 PMEL-201ENST00000449260 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 AC012508.2-201ENST00000567613 1472 ntBASIC10.22□□□□□ -0.77
SVIPQ8NHG7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 SEMA4A-201ENST00000355014 3137 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SVIPQ8NHG7 FGF1-204ENST00000378046 2582 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms