Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 STK25P1-201ENST00000585406 838 ntBASIC14.43□□□□□ -0.1
BEST4Q8NFU0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 CICP13-201ENST00000422015 2789 ntBASIC14.43□□□□□ -0.1
BEST4Q8NFU0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST4Q8NFU0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 TUBB8P12-201ENST00000308911 1335 ntBASIC14.42□□□□□ -0.1
BEST4Q8NFU0 TUBB7P-202ENST00000428444 1305 ntBASIC14.42□□□□□ -0.1
BEST4Q8NFU0 TUBB8P7-204ENST00000567960 1332 ntBASIC14.42□□□□□ -0.1
BEST4Q8NFU0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 KRT8P10-201ENST00000450021 1447 ntBASIC14.42□□□□□ -0.1
BEST4Q8NFU0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.42□□□□□ -0.1
BEST4Q8NFU0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 Z83836.1-201ENST00000624605 1642 ntBASIC14.42□□□□□ -0.1
BEST4Q8NFU0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 AC145285.6-201ENST00000604632 637 ntBASIC14.42□□□□□ -0.1
BEST4Q8NFU0 AC011558.1-201ENST00000623459 338 ntBASIC14.42□□□□□ -0.1
BEST4Q8NFU0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 AC006058.4-201ENST00000624016 1670 ntBASIC14.42□□□□□ -0.1
BEST4Q8NFU0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
BEST4Q8NFU0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms