Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 MIR658-201ENST00000385210 100 ntBASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CARMIL3Q8ND23 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 RN7SL837P-201ENST00000463010 287 ntBASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 AC011495.1-201ENST00000498085 584 ntBASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 AC055876.2-201ENST00000531834 546 ntBASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 AL606495.2-201ENST00000605867 535 ntBASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CARMIL3Q8ND23 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 AL023806.1-201ENST00000603994 1649 ntBASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.6■□□□□ 0.89
CARMIL3Q8ND23 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 AC093724.1-201ENST00000448659 1027 ntBASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 KRT17P8-201ENST00000540749 863 ntBASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 AC106886.1-201ENST00000568660 600 ntBASIC20.59■□□□□ 0.89
CARMIL3Q8ND23 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms