Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35BQ8NCS4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TMEM35BQ8NCS4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TMEM35BQ8NCS4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TMEM35BQ8NCS4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35BQ8NCS4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35BQ8NCS4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35BQ8NCS4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35BQ8NCS4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 RNA5SP416-201ENST00000516838 111 ntBASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 KRT19P2-202ENST00000557173 1012 ntBASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 AC027601.4-201ENST00000611259 610 ntBASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM35BQ8NCS4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM35BQ8NCS4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM35BQ8NCS4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM35BQ8NCS4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.58■□□□□ 0.41
TMEM35BQ8NCS4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.58■□□□□ 0.41
TMEM35BQ8NCS4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM35BQ8NCS4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TMEM35BQ8NCS4 AC092364.2-201ENST00000596710 2692 ntBASIC17.58■□□□□ 0.41
TMEM35BQ8NCS4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM35BQ8NCS4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 POU5F1P6-201ENST00000466990 990 ntBASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 FAM197Y3-203ENST00000618346 717 ntBASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TMEM35BQ8NCS4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 CYP2T1P-202ENST00000641596 2535 ntBASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM35BQ8NCS4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms