Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MRPL20P1-201ENST00000400819 433 ntBASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 RN7SL510P-201ENST00000581311 263 ntBASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 FAM215A-202ENST00000632077 792 ntBASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 AP002414.3-201ENST00000589352 1468 ntBASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.26■□□□□ 0.03
LSMEM1Q8N8F7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AC104581.4-201ENST00000623126 3052 ntBASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AC079781.3-201ENST00000449110 356 ntBASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 OR7E47P-204ENST00000575924 449 ntBASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AC148477.8-201ENST00000624298 468 ntBASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AC026691.1-201ENST00000602502 2017 ntBASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LSMEM1Q8N8F7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 AL450487.1-201ENST00000426799 995 ntBASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.24■□□□□ 0.03
LSMEM1Q8N8F7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms