Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 FAM185BP-201ENST00000443595 716 ntBASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 AC087163.2-201ENST00000457299 853 ntBASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 SLC25A6P2-201ENST00000497974 877 ntBASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 AC004449.1-201ENST00000564240 433 ntBASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC33Q8N5R6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 AC004461.1-201ENST00000412461 403 ntBASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 PAWRP1-201ENST00000451083 565 ntBASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 AC004835.2-201ENST00000603762 682 ntBASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 PCDHB19P-201ENST00000570871 2371 ntBASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC33Q8N5R6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 MIR770-201ENST00000390219 98 ntBASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 ACTL9-202ENST00000612068 1252 ntBASIC17.43■□□□□ 0.38
CCDC33Q8N5R6 AL513210.1-201ENST00000629608 234 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms