Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AC122714.2-201ENST00000502787 707 ntBASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AC096582.2-201ENST00000510860 516 ntBASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AL591684.3-201ENST00000605187 298 ntBASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
DEPDC4Q8N2C3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 AC007967.3-201ENST00000434308 558 ntBASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 STK25P1-201ENST00000585406 838 ntBASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 AL353801.3-201ENST00000609898 542 ntBASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 AL135999.2-201ENST00000622438 1686 ntBASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DEPDC4Q8N2C3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.53■□□□□ 0.08
DEPDC4Q8N2C3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DEPDC4Q8N2C3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
DEPDC4Q8N2C3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
DEPDC4Q8N2C3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
DEPDC4Q8N2C3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms