Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 AP001889.1-201ENST00000525414 633 ntBASIC20.53■□□□□ 0.88
COL23A1Q86Y22 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.53■□□□□ 0.88
COL23A1Q86Y22 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 RPL13AP20-201ENST00000459725 609 ntBASIC20.52■□□□□ 0.88
COL23A1Q86Y22 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 AL359711.2-201ENST00000563105 872 ntBASIC20.52■□□□□ 0.88
COL23A1Q86Y22 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 LINC01115-203ENST00000606068 577 ntBASIC20.52■□□□□ 0.88
COL23A1Q86Y22 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL23A1Q86Y22 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.52■□□□□ 0.87
COL23A1Q86Y22 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL23A1Q86Y22 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL23A1Q86Y22 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
COL23A1Q86Y22 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.52■□□□□ 0.87
COL23A1Q86Y22 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 FO393414.2-201ENST00000405153 598 ntBASIC20.51■□□□□ 0.87
COL23A1Q86Y22 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 RN7SL190P-201ENST00000582519 257 ntBASIC20.51■□□□□ 0.87
COL23A1Q86Y22 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 AC009542.2-202ENST00000619004 1067 ntBASIC20.51■□□□□ 0.87
COL23A1Q86Y22 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL23A1Q86Y22 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms