Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CCDC62Q6P9F0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 AC100757.3-201ENST00000622361 1406 ntBASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 AL512638.1-201ENST00000457493 794 ntBASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 TERF1P3-201ENST00000505638 1227 ntBASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 AC027369.6-201ENST00000525520 931 ntBASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 AC190387.1-201ENST00000551683 408 ntBASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 SPDYE12P-201ENST00000618416 771 ntBASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 AL139011.1-202ENST00000642063 584 ntBASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC62Q6P9F0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 AC015922.1-201ENST00000421102 1152 ntBASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 AL138828.2-201ENST00000615812 383 ntBASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC62Q6P9F0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AC139713.2-201ENST00000641328 2723 ntBASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AC098859.1-201ENST00000502915 1238 ntBASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms