Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 AL355312.1-201ENST00000407115 2176 ntBASIC14.19□□□□□ -0.14
LRRK2Q5S007 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 AC016694.1-201ENST00000434179 700 ntBASIC14.19□□□□□ -0.14
LRRK2Q5S007 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRK2Q5S007 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRK2Q5S007 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 MIR3907-201ENST00000579424 151 ntBASIC14.18□□□□□ -0.14
LRRK2Q5S007 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.18□□□□□ -0.14
LRRK2Q5S007 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 AC104581.1-202ENST00000635932 2618 ntBASIC14.18□□□□□ -0.14
LRRK2Q5S007 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 AC061975.2-201ENST00000581722 295 ntBASIC14.18□□□□□ -0.14
LRRK2Q5S007 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 FZD10-202ENST00000539839 3282 ntBASIC14.18□□□□□ -0.14
LRRK2Q5S007 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRK2Q5S007 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRK2Q5S007 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms