Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 AC139887.3-201ENST00000568585 713 ntBASIC16.32■□□□□ 0.2
SFT2D3Q587I9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.32■□□□□ 0.2
SFT2D3Q587I9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 AC009336.1-201ENST00000608941 1553 ntBASIC16.32■□□□□ 0.2
SFT2D3Q587I9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 AC099063.4-201ENST00000641099 1602 ntBASIC16.32■□□□□ 0.2
SFT2D3Q587I9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.32■□□□□ 0.2
SFT2D3Q587I9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 IL9RP2-201ENST00000423948 1312 ntBASIC16.31■□□□□ 0.2
SFT2D3Q587I9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 AL022342.1-201ENST00000400363 863 ntBASIC16.31■□□□□ 0.2
SFT2D3Q587I9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 LAGE3P1-201ENST00000425356 484 ntBASIC16.31■□□□□ 0.2
SFT2D3Q587I9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 BX640515.1-201ENST00000617215 977 ntBASIC16.31■□□□□ 0.2
SFT2D3Q587I9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 AC008735.5-201ENST00000623544 497 ntBASIC16.31■□□□□ 0.2
SFT2D3Q587I9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 ALOX12P2-203ENST00000570921 1945 ntBASIC16.31■□□□□ 0.2
SFT2D3Q587I9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D3Q587I9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 AC012640.2-201ENST00000561606 901 ntBASIC16.3■□□□□ 0.2
SFT2D3Q587I9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 AC116407.3-201ENST00000623905 1129 ntBASIC16.3■□□□□ 0.2
SFT2D3Q587I9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D3Q587I9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms