Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCS1Q01581 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HMGCS1Q01581 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 AP002414.3-201ENST00000589352 1468 ntBASIC16.04■□□□□ 0.16
HMGCS1Q01581 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 FAM197Y8-203ENST00000450145 560 ntBASIC16.04■□□□□ 0.16
HMGCS1Q01581 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 AC012640.2-201ENST00000561606 901 ntBASIC16.04■□□□□ 0.16
HMGCS1Q01581 AC008667.4-201ENST00000607370 168 ntBASIC16.04■□□□□ 0.16
HMGCS1Q01581 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 GGTLC5P-201ENST00000617623 998 ntBASIC16.04■□□□□ 0.16
HMGCS1Q01581 AC008735.5-201ENST00000623544 497 ntBASIC16.04■□□□□ 0.16
HMGCS1Q01581 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGCS1Q01581 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.04■□□□□ 0.16
HMGCS1Q01581 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HMGCS1Q01581 AC007950.2-201ENST00000615045 2347 ntBASIC16.03■□□□□ 0.16
HMGCS1Q01581 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCS1Q01581 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCS1Q01581 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCS1Q01581 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCS1Q01581 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCS1Q01581 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCS1Q01581 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 AC018712.1-201ENST00000455767 687 ntBASIC16.03■□□□□ 0.16
HMGCS1Q01581 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 IGHV3-65-201ENST00000523210 341 ntBASIC16.03■□□□□ 0.16
HMGCS1Q01581 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms