Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 TOP3BP1-201ENST00000420768 1380 ntBASIC13.45□□□□□ -0.26
CX3CL1P78423 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CL1P78423 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CL1P78423 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CX3CL1P78423 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CL1P78423 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.44□□□□□ -0.26
CX3CL1P78423 FDX1P1-201ENST00000449115 551 ntBASIC13.44□□□□□ -0.26
CX3CL1P78423 AC079776.4-201ENST00000511039 504 ntBASIC13.44□□□□□ -0.26
CX3CL1P78423 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CL1P78423 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.44□□□□□ -0.26
CX3CL1P78423 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.44□□□□□ -0.26
CX3CL1P78423 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.44□□□□□ -0.26
CX3CL1P78423 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CL1P78423 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CL1P78423 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CL1P78423 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CL1P78423 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CL1P78423 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CX3CL1P78423 AC006449.5-201ENST00000610658 2098 ntBASIC13.44□□□□□ -0.26
CX3CL1P78423 AC068418.2-201ENST00000577309 3703 ntBASIC13.44□□□□□ -0.26
CX3CL1P78423 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CL1P78423 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CL1P78423 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CX3CL1P78423 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CL1P78423 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CL1P78423 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CL1P78423 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CL1P78423 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CX3CL1P78423 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.43□□□□□ -0.26
CX3CL1P78423 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CX3CL1P78423 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.43□□□□□ -0.26
CX3CL1P78423 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 MRPL20P1-201ENST00000400819 433 ntBASIC13.43□□□□□ -0.26
CX3CL1P78423 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.43□□□□□ -0.26
CX3CL1P78423 AC108073.2-201ENST00000464002 357 ntBASIC13.43□□□□□ -0.26
CX3CL1P78423 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CX3CL1P78423 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 AC007950.2-201ENST00000615045 2347 ntBASIC13.43□□□□□ -0.26
CX3CL1P78423 AC004790.2-201ENST00000623588 572 ntBASIC13.43□□□□□ -0.26
CX3CL1P78423 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.43□□□□□ -0.26
CX3CL1P78423 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CX3CL1P78423 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.43□□□□□ -0.26
CX3CL1P78423 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CX3CL1P78423 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CX3CL1P78423 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CL1P78423 AC129492.6-201ENST00000611383 1305 ntBASIC13.42□□□□□ -0.26
CX3CL1P78423 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms