Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RPL39P62891 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
RPL39P62891 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 GGT3P-204ENST00000453783 1664 ntBASIC11.81□□□□□ -0.52
RPL39P62891 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
RPL39P62891 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.8□□□□□ -0.52
RPL39P62891 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.8□□□□□ -0.52
RPL39P62891 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.8□□□□□ -0.52
RPL39P62891 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.8□□□□□ -0.52
RPL39P62891 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.8□□□□□ -0.52
RPL39P62891 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.8□□□□□ -0.52
RPL39P62891 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 AL671710.1-201ENST00000610245 2349 ntBASIC11.8□□□□□ -0.52
RPL39P62891 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RPL39P62891 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.8□□□□□ -0.52
RPL39P62891 KRT18P38-201ENST00000449496 1282 ntBASIC11.8□□□□□ -0.52
RPL39P62891 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.8□□□□□ -0.52
RPL39P62891 YBX1P2-201ENST00000489612 999 ntBASIC11.8□□□□□ -0.52
RPL39P62891 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.8□□□□□ -0.52
RPL39P62891 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.8□□□□□ -0.52
RPL39P62891 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.8□□□□□ -0.52
RPL39P62891 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.8□□□□□ -0.52
RPL39P62891 AC139887.4-201ENST00000607877 719 ntBASIC11.8□□□□□ -0.52
RPL39P62891 AC073592.5-201ENST00000624854 528 ntBASIC11.8□□□□□ -0.52
RPL39P62891 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RPL39P62891 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RPL39P62891 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 AC013268.4-201ENST00000637413 2228 ntBASIC11.8□□□□□ -0.52
RPL39P62891 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.8□□□□□ -0.52
RPL39P62891 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.8□□□□□ -0.52
RPL39P62891 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.8□□□□□ -0.52
RPL39P62891 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 AP005117.1-202ENST00000581724 1908 ntBASIC11.8□□□□□ -0.52
RPL39P62891 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPL39P62891 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RPL39P62891 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RPL39P62891 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.79□□□□□ -0.52
RPL39P62891 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RPL39P62891 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
RPL39P62891 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RPL39P62891 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.79□□□□□ -0.52
RPL39P62891 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 AC112907.2-201ENST00000448639 330 ntBASIC11.79□□□□□ -0.52
RPL39P62891 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.79□□□□□ -0.52
RPL39P62891 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.79□□□□□ -0.52
RPL39P62891 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.79□□□□□ -0.52
RPL39P62891 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.79□□□□□ -0.52
RPL39P62891 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RPL39P62891 AL592071.1-201ENST00000611956 408 ntBASIC11.79□□□□□ -0.52
RPL39P62891 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.79□□□□□ -0.52
RPL39P62891 AP006294.2-201ENST00000641667 209 ntBASIC11.79□□□□□ -0.52
RPL39P62891 MIR600HG-201ENST00000449175 5984 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms