Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.35□□□□□ -0.11
ACTBP60709 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
ACTBP60709 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.35□□□□□ -0.11
ACTBP60709 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ACTBP60709 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.35□□□□□ -0.11
ACTBP60709 FAM220CP-201ENST00000395253 831 ntBASIC14.35□□□□□ -0.11
ACTBP60709 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.35□□□□□ -0.11
ACTBP60709 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.35□□□□□ -0.11
ACTBP60709 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.35□□□□□ -0.11
ACTBP60709 FAM86EP-206ENST00000510506 987 ntBASIC14.35□□□□□ -0.11
ACTBP60709 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
ACTBP60709 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.35□□□□□ -0.11
ACTBP60709 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.35□□□□□ -0.11
ACTBP60709 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ACTBP60709 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
ACTBP60709 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 AC144831.1-201ENST00000573312 2656 ntBASIC14.34□□□□□ -0.11
ACTBP60709 AC006449.6-201ENST00000612330 2296 ntBASIC14.34□□□□□ -0.11
ACTBP60709 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ACTBP60709 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTBP60709 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTBP60709 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.34□□□□□ -0.11
ACTBP60709 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ACTBP60709 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.34□□□□□ -0.11
ACTBP60709 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTBP60709 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTBP60709 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTBP60709 GGT4P-201ENST00000623672 1708 ntBASIC14.34□□□□□ -0.11
ACTBP60709 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.34□□□□□ -0.11
ACTBP60709 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ACTBP60709 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ACTBP60709 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.34□□□□□ -0.11
ACTBP60709 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ACTBP60709 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
ACTBP60709 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ACTBP60709 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ACTBP60709 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ACTBP60709 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.33□□□□□ -0.11
ACTBP60709 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ACTBP60709 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms