Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
CLDN20P56880 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN20P56880 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN20P56880 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN20P56880 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN20P56880 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN20P56880 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN20P56880 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CLDN20P56880 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN20P56880 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN20P56880 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN20P56880 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN20P56880 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN20P56880 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN20P56880 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN20P56880 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN20P56880 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN20P56880 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN20P56880 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN20P56880 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN20P56880 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN20P56880 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN20P56880 AL513190.1-201ENST00000621254 727 ntBASIC15.27■□□□□ 0.04
CLDN20P56880 REXO1L3P-201ENST00000622202 1288 ntBASIC15.27■□□□□ 0.04
CLDN20P56880 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN20P56880 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN20P56880 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN20P56880 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN20P56880 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN20P56880 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CLDN20P56880 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN20P56880 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN20P56880 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN20P56880 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN20P56880 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN20P56880 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN20P56880 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN20P56880 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 FER1L4-210ENST00000615531 5998 ntBASIC15.26■□□□□ 0.03
CLDN20P56880 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CLDN20P56880 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN20P56880 BCAR1-209ENST00000546196 1340 ntBASIC15.26■□□□□ 0.03
CLDN20P56880 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN20P56880 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN20P56880 RHOQP3-201ENST00000437982 621 ntBASIC15.26■□□□□ 0.03
CLDN20P56880 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN20P56880 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN20P56880 DUX4L17-201ENST00000557360 1267 ntBASIC15.26■□□□□ 0.03
CLDN20P56880 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN20P56880 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN20P56880 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN20P56880 AC023511.2-201ENST00000618803 211 ntBASIC15.26■□□□□ 0.03
CLDN20P56880 AC004877.2-201ENST00000623941 599 ntBASIC15.26■□□□□ 0.03
CLDN20P56880 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN20P56880 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CLDN20P56880 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN20P56880 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN20P56880 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLDN20P56880 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms