Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.69■□□□□ 0.58
EPHB4P54760 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHB4P54760 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHB4P54760 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
EPHB4P54760 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
EPHB4P54760 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
EPHB4P54760 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.68■□□□□ 0.58
EPHB4P54760 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHB4P54760 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
EPHB4P54760 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
EPHB4P54760 AC027307.3-201ENST00000594262 1100 ntBASIC18.68■□□□□ 0.58
EPHB4P54760 AC084121.4-201ENST00000641598 221 ntBASIC18.68■□□□□ 0.58
EPHB4P54760 AF228730.8-201ENST00000642140 221 ntBASIC18.68■□□□□ 0.58
EPHB4P54760 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
EPHB4P54760 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHB4P54760 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHB4P54760 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
EPHB4P54760 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
EPHB4P54760 AC106886.4-201ENST00000623557 2502 ntBASIC18.68■□□□□ 0.58
EPHB4P54760 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHB4P54760 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHB4P54760 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.67■□□□□ 0.58
EPHB4P54760 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
EPHB4P54760 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EPHB4P54760 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
EPHB4P54760 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.67■□□□□ 0.58
EPHB4P54760 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
EPHB4P54760 PIN1P1-201ENST00000412108 996 ntBASIC18.67■□□□□ 0.58
EPHB4P54760 SPDYE7P-202ENST00000420373 878 ntBASIC18.67■□□□□ 0.58
EPHB4P54760 ARSEP1-201ENST00000420443 635 ntBASIC18.67■□□□□ 0.58
EPHB4P54760 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.67■□□□□ 0.58
EPHB4P54760 IGHV3-62-201ENST00000520057 340 ntBASIC18.67■□□□□ 0.58
EPHB4P54760 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.67■□□□□ 0.58
EPHB4P54760 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.67■□□□□ 0.58
EPHB4P54760 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
EPHB4P54760 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.67■□□□□ 0.58
EPHB4P54760 MIR6080-201ENST00000617359 66 ntBASIC18.67■□□□□ 0.58
EPHB4P54760 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.67■□□□□ 0.58
EPHB4P54760 AC105020.1-201ENST00000435356 2205 ntBASIC18.67■□□□□ 0.58
EPHB4P54760 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHB4P54760 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
EPHB4P54760 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHB4P54760 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHB4P54760 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHB4P54760 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHB4P54760 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHB4P54760 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
EPHB4P54760 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHB4P54760 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHB4P54760 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EPHB4P54760 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.66■□□□□ 0.58
EPHB4P54760 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHB4P54760 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHB4P54760 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.66■□□□□ 0.58
EPHB4P54760 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
EPHB4P54760 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHB4P54760 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
EPHB4P54760 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHB4P54760 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EPHB4P54760 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.66■□□□□ 0.58
EPHB4P54760 AGGF1P2-201ENST00000426656 2106 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms