Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC23.38■■□□□ 1.33
CLTCL1P53675 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC23.38■■□□□ 1.33
CLTCL1P53675 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CLTCL1P53675 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC23.38■■□□□ 1.33
CLTCL1P53675 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CLTCL1P53675 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC23.38■■□□□ 1.33
CLTCL1P53675 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLTCL1P53675 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC23.38■■□□□ 1.33
CLTCL1P53675 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CLTCL1P53675 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC23.38■■□□□ 1.33
CLTCL1P53675 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC23.38■■□□□ 1.33
CLTCL1P53675 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLTCL1P53675 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLTCL1P53675 SDHAP3-202ENST00000515467 728 ntBASIC23.37■■□□□ 1.33
CLTCL1P53675 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC23.37■■□□□ 1.33
CLTCL1P53675 AL158212.4-201ENST00000624062 1286 ntBASIC23.37■■□□□ 1.33
CLTCL1P53675 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC23.37■■□□□ 1.33
CLTCL1P53675 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CLTCL1P53675 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CLTCL1P53675 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLTCL1P53675 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
CLTCL1P53675 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLTCL1P53675 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC23.37■■□□□ 1.33
CLTCL1P53675 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLTCL1P53675 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CLTCL1P53675 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
CLTCL1P53675 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLTCL1P53675 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC23.37■■□□□ 1.33
CLTCL1P53675 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC23.37■■□□□ 1.33
CLTCL1P53675 TTTY23B-201ENST00000442790 549 ntBASIC23.37■■□□□ 1.33
CLTCL1P53675 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC23.37■■□□□ 1.33
CLTCL1P53675 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC23.37■■□□□ 1.33
CLTCL1P53675 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC23.37■■□□□ 1.33
CLTCL1P53675 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC23.37■■□□□ 1.33
CLTCL1P53675 SNX29P1-201ENST00000548357 1007 ntBASIC23.37■■□□□ 1.33
CLTCL1P53675 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
CLTCL1P53675 AL008721.1-201ENST00000609964 604 ntBASIC23.37■■□□□ 1.33
CLTCL1P53675 MIR6069-201ENST00000620069 79 ntBASIC23.37■■□□□ 1.33
CLTCL1P53675 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC23.37■■□□□ 1.33
CLTCL1P53675 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLTCL1P53675 AC005622.1-201ENST00000636801 1703 ntBASIC23.37■■□□□ 1.33
CLTCL1P53675 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLTCL1P53675 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLTCL1P53675 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLTCL1P53675 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
CLTCL1P53675 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC23.36■■□□□ 1.33
CLTCL1P53675 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC23.36■■□□□ 1.33
CLTCL1P53675 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
CLTCL1P53675 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLTCL1P53675 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLTCL1P53675 AC087499.6-201ENST00000411576 835 ntBASIC23.36■■□□□ 1.33
CLTCL1P53675 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLTCL1P53675 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC23.36■■□□□ 1.33
CLTCL1P53675 GALT-202ENST00000450095 1280 ntTSL 2 BASIC23.36■■□□□ 1.33
CLTCL1P53675 GLI4-203ENST00000517468 963 ntTSL 5 BASIC23.36■■□□□ 1.33
CLTCL1P53675 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLTCL1P53675 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC23.36■■□□□ 1.33
CLTCL1P53675 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CLTCL1P53675 WFDC1-204ENST00000613603 549 ntBASIC23.36■■□□□ 1.33
CLTCL1P53675 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CLTCL1P53675 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLTCL1P53675 PCDHB18P-201ENST00000524813 2368 ntBASIC23.36■■□□□ 1.33
CLTCL1P53675 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CLTCL1P53675 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLTCL1P53675 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLTCL1P53675 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC23.35■■□□□ 1.33
CLTCL1P53675 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLTCL1P53675 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLTCL1P53675 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLTCL1P53675 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLTCL1P53675 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLTCL1P53675 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC23.35■■□□□ 1.33
CLTCL1P53675 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLTCL1P53675 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC23.35■■□□□ 1.33
CLTCL1P53675 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLTCL1P53675 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC23.35■■□□□ 1.33
CLTCL1P53675 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC23.35■■□□□ 1.33
CLTCL1P53675 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC23.35■■□□□ 1.33
CLTCL1P53675 RRP7BP-205ENST00000566851 833 ntBASIC23.35■■□□□ 1.33
CLTCL1P53675 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC23.35■■□□□ 1.33
CLTCL1P53675 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC23.35■■□□□ 1.33
CLTCL1P53675 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLTCL1P53675 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.35■■□□□ 1.33
CLTCL1P53675 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
CLTCL1P53675 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC23.34■■□□□ 1.33
CLTCL1P53675 Z97205.2-201ENST00000564697 1639 ntBASIC23.34■■□□□ 1.33
CLTCL1P53675 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CLTCL1P53675 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLTCL1P53675 MXI1-205ENST00000393134 889 ntTSL 2 BASIC23.34■■□□□ 1.33
CLTCL1P53675 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms