Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.22■□□□□ 0.35
SCNN1AP37088 AC105233.2-201ENST00000523697 349 ntBASIC17.22■□□□□ 0.35
SCNN1AP37088 AF228730.5-201ENST00000530288 346 ntBASIC17.22■□□□□ 0.35
SCNN1AP37088 AC243562.1-201ENST00000560672 389 ntBASIC17.22■□□□□ 0.35
SCNN1AP37088 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.22■□□□□ 0.35
SCNN1AP37088 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.22■□□□□ 0.35
SCNN1AP37088 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.22■□□□□ 0.35
SCNN1AP37088 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.22■□□□□ 0.35
SCNN1AP37088 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.22■□□□□ 0.35
SCNN1AP37088 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SCNN1AP37088 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 PCDHB19P-201ENST00000570871 2371 ntBASIC17.22■□□□□ 0.35
SCNN1AP37088 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCNN1AP37088 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
SCNN1AP37088 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SCNN1AP37088 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.21■□□□□ 0.35
SCNN1AP37088 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
SCNN1AP37088 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SCNN1AP37088 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.21■□□□□ 0.35
SCNN1AP37088 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.21■□□□□ 0.35
SCNN1AP37088 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 REXO1L8P-201ENST00000604378 1897 ntBASIC17.21■□□□□ 0.35
SCNN1AP37088 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SCNN1AP37088 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.21■□□□□ 0.35
SCNN1AP37088 GPX1P2-201ENST00000429271 606 ntBASIC17.21■□□□□ 0.35
SCNN1AP37088 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.21■□□□□ 0.35
SCNN1AP37088 KRT8P23-201ENST00000560090 1207 ntBASIC17.21■□□□□ 0.35
SCNN1AP37088 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.21■□□□□ 0.35
SCNN1AP37088 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SCNN1AP37088 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.21■□□□□ 0.35
SCNN1AP37088 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SCNN1AP37088 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.21■□□□□ 0.35
SCNN1AP37088 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.21■□□□□ 0.35
SCNN1AP37088 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.21■□□□□ 0.35
SCNN1AP37088 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SCNN1AP37088 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCNN1AP37088 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.21■□□□□ 0.34
SCNN1AP37088 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SCNN1AP37088 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SCNN1AP37088 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SCNN1AP37088 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SCNN1AP37088 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
SCNN1AP37088 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SCNN1AP37088 AC006449.6-201ENST00000612330 2296 ntBASIC17.21■□□□□ 0.34
SCNN1AP37088 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SCNN1AP37088 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SCNN1AP37088 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SCNN1AP37088 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.2■□□□□ 0.34
SCNN1AP37088 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SCNN1AP37088 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.2■□□□□ 0.34
SCNN1AP37088 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SCNN1AP37088 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.2■□□□□ 0.34
SCNN1AP37088 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.2■□□□□ 0.34
SCNN1AP37088 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.2■□□□□ 0.34
SCNN1AP37088 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCNN1AP37088 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
SCNN1AP37088 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SCNN1AP37088 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.2■□□□□ 0.34
SCNN1AP37088 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.2■□□□□ 0.34
SCNN1AP37088 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
SCNN1AP37088 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms