Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
HMGCLP35914 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
HMGCLP35914 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 MIR3687-1-201ENST00000614492 61 ntBASIC16.51■□□□□ 0.23
HMGCLP35914 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGCLP35914 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGCLP35914 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HMGCLP35914 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCLP35914 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCLP35914 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCLP35914 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCLP35914 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
HMGCLP35914 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HMGCLP35914 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
HMGCLP35914 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
HMGCLP35914 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HMGCLP35914 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCLP35914 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HMGCLP35914 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCLP35914 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGCLP35914 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGCLP35914 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HMGCLP35914 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCLP35914 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGCLP35914 RN7SL589P-201ENST00000481268 310 ntBASIC16.5■□□□□ 0.23
HMGCLP35914 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
HMGCLP35914 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGCLP35914 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
HMGCLP35914 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HMGCLP35914 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCLP35914 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HMGCLP35914 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGCLP35914 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCLP35914 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCLP35914 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCLP35914 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGCLP35914 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HMGCLP35914 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGCLP35914 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HMGCLP35914 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCLP35914 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCLP35914 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HMGCLP35914 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCLP35914 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCLP35914 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCLP35914 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCLP35914 TFAMP1-201ENST00000412727 736 ntBASIC16.49■□□□□ 0.23
HMGCLP35914 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGCLP35914 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCLP35914 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HMGCLP35914 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.49■□□□□ 0.23
HMGCLP35914 AC112482.1-201ENST00000492080 688 ntBASIC16.49■□□□□ 0.23
HMGCLP35914 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCLP35914 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.49■□□□□ 0.23
HMGCLP35914 AL135744.1-201ENST00000565098 629 ntBASIC16.49■□□□□ 0.23
HMGCLP35914 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.49■□□□□ 0.23
HMGCLP35914 AC010327.4-202ENST00000591484 748 ntBASIC16.49■□□□□ 0.23
HMGCLP35914 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCLP35914 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGCLP35914 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCLP35914 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCLP35914 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCLP35914 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCLP35914 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCLP35914 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGCLP35914 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
HMGCLP35914 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HMGCLP35914 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms