Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TM4SF1P30408 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TM4SF1P30408 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TM4SF1P30408 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TM4SF1P30408 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TM4SF1P30408 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.36■□□□□ 0.85
TM4SF1P30408 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.36■□□□□ 0.85
TM4SF1P30408 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.36■□□□□ 0.85
TM4SF1P30408 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.36■□□□□ 0.85
TM4SF1P30408 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.36■□□□□ 0.85
TM4SF1P30408 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.36■□□□□ 0.85
TM4SF1P30408 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.36■□□□□ 0.85
TM4SF1P30408 SLC25A47P1-201ENST00000531577 414 ntBASIC20.36■□□□□ 0.85
TM4SF1P30408 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.36■□□□□ 0.85
TM4SF1P30408 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TM4SF1P30408 GPR182-203ENST00000622922 591 ntBASIC20.36■□□□□ 0.85
TM4SF1P30408 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TM4SF1P30408 AL391256.1-201ENST00000443260 1855 ntBASIC20.36■□□□□ 0.85
TM4SF1P30408 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.36■□□□□ 0.85
TM4SF1P30408 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.36■□□□□ 0.85
TM4SF1P30408 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TM4SF1P30408 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.36■□□□□ 0.85
TM4SF1P30408 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TM4SF1P30408 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF1P30408 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TM4SF1P30408 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF1P30408 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF1P30408 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.35■□□□□ 0.85
TM4SF1P30408 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF1P30408 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.35■□□□□ 0.85
TM4SF1P30408 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF1P30408 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF1P30408 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TM4SF1P30408 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.35■□□□□ 0.85
TM4SF1P30408 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
TM4SF1P30408 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.35■□□□□ 0.85
TM4SF1P30408 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.35■□□□□ 0.85
TM4SF1P30408 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.35■□□□□ 0.85
TM4SF1P30408 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.35■□□□□ 0.85
TM4SF1P30408 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.35■□□□□ 0.85
TM4SF1P30408 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.35■□□□□ 0.85
TM4SF1P30408 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.35■□□□□ 0.85
TM4SF1P30408 GPAA1P2-202ENST00000606848 1787 ntBASIC20.35■□□□□ 0.85
TM4SF1P30408 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF1P30408 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TM4SF1P30408 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TM4SF1P30408 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
TM4SF1P30408 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF1P30408 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF1P30408 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.35■□□□□ 0.85
TM4SF1P30408 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF1P30408 AL645728.1-201ENST00000366221 2101 ntBASIC20.35■□□□□ 0.85
TM4SF1P30408 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
TM4SF1P30408 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF1P30408 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.35■□□□□ 0.85
TM4SF1P30408 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.35■□□□□ 0.85
TM4SF1P30408 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 AC018665.1-201ENST00000622927 1362 ntBASIC20.34■□□□□ 0.85
TM4SF1P30408 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.34■□□□□ 0.85
TM4SF1P30408 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TM4SF1P30408 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TM4SF1P30408 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TM4SF1P30408 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.34■□□□□ 0.85
TM4SF1P30408 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.34■□□□□ 0.85
TM4SF1P30408 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TM4SF1P30408 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.34■□□□□ 0.85
TM4SF1P30408 RN7SL399P-201ENST00000471648 279 ntBASIC20.34■□□□□ 0.85
TM4SF1P30408 AC104596.2-201ENST00000512793 793 ntBASIC20.34■□□□□ 0.85
TM4SF1P30408 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.34■□□□□ 0.85
TM4SF1P30408 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.34■□□□□ 0.85
TM4SF1P30408 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.34■□□□□ 0.85
TM4SF1P30408 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.34■□□□□ 0.85
TM4SF1P30408 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.34■□□□□ 0.85
TM4SF1P30408 AC233724.13-201ENST00000598383 410 ntBASIC20.34■□□□□ 0.85
TM4SF1P30408 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.34■□□□□ 0.85
TM4SF1P30408 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
TM4SF1P30408 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms