Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.43■□□□□ 0.54
CTGFP29279 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CTGFP29279 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CTGFP29279 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.43■□□□□ 0.54
CTGFP29279 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 RPL7P3-201ENST00000441388 714 ntBASIC18.43■□□□□ 0.54
CTGFP29279 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.43■□□□□ 0.54
CTGFP29279 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.43■□□□□ 0.54
CTGFP29279 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CTGFP29279 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.43■□□□□ 0.54
CTGFP29279 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.43■□□□□ 0.54
CTGFP29279 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.43■□□□□ 0.54
CTGFP29279 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.43■□□□□ 0.54
CTGFP29279 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CTGFP29279 CYP4F24P-201ENST00000586049 1580 ntBASIC18.42■□□□□ 0.54
CTGFP29279 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CTGFP29279 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CTGFP29279 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.42■□□□□ 0.54
CTGFP29279 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CTGFP29279 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.42■□□□□ 0.54
CTGFP29279 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CTGFP29279 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 MIR1247-201ENST00000408206 136 ntBASIC18.42■□□□□ 0.54
CTGFP29279 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CTGFP29279 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.42■□□□□ 0.54
CTGFP29279 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CTGFP29279 AL359711.2-201ENST00000563105 872 ntBASIC18.42■□□□□ 0.54
CTGFP29279 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.42■□□□□ 0.54
CTGFP29279 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.42■□□□□ 0.54
CTGFP29279 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.42■□□□□ 0.54
CTGFP29279 AL022328.1-201ENST00000610050 478 ntBASIC18.42■□□□□ 0.54
CTGFP29279 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.42■□□□□ 0.54
CTGFP29279 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CTGFP29279 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.42■□□□□ 0.54
CTGFP29279 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTGFP29279 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.42■□□□□ 0.54
CTGFP29279 Z97205.2-201ENST00000564697 1639 ntBASIC18.41■□□□□ 0.54
CTGFP29279 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.41■□□□□ 0.54
CTGFP29279 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.41■□□□□ 0.54
CTGFP29279 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.41■□□□□ 0.54
CTGFP29279 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.41■□□□□ 0.54
CTGFP29279 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTGFP29279 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.41■□□□□ 0.54
CTGFP29279 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.41■□□□□ 0.54
CTGFP29279 FO393414.2-201ENST00000405153 598 ntBASIC18.41■□□□□ 0.54
CTGFP29279 AL442647.2-201ENST00000429864 857 ntBASIC18.41■□□□□ 0.54
CTGFP29279 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.41■□□□□ 0.54
CTGFP29279 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.41■□□□□ 0.54
CTGFP29279 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.41■□□□□ 0.54
CTGFP29279 C2orf69P2-201ENST00000562032 1123 ntBASIC18.41■□□□□ 0.54
CTGFP29279 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.41■□□□□ 0.54
CTGFP29279 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CTGFP29279 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.41■□□□□ 0.54
CTGFP29279 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.41■□□□□ 0.54
CTGFP29279 CROCCP2-202ENST00000412962 2773 ntBASIC18.41■□□□□ 0.54
CTGFP29279 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTGFP29279 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.4■□□□□ 0.54
CTGFP29279 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.4■□□□□ 0.54
CTGFP29279 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CTGFP29279 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTGFP29279 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms