Protein–RNA interactions for Protein: P26842

CD27, CD27 antigen, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD27P26842 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD27P26842 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD27P26842 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.17■□□□□ 0.18
CD27P26842 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD27P26842 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD27P26842 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD27P26842 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.17■□□□□ 0.18
CD27P26842 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CD27P26842 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD27P26842 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD27P26842 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
CD27P26842 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CD27P26842 PP12613-201ENST00000424958 2230 ntBASIC16.17■□□□□ 0.18
CD27P26842 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 AC138969.3-201ENST00000546612 1459 ntBASIC16.16■□□□□ 0.18
CD27P26842 AC138932.2-201ENST00000548268 1459 ntBASIC16.16■□□□□ 0.18
CD27P26842 AC126755.4-201ENST00000549796 1459 ntBASIC16.16■□□□□ 0.18
CD27P26842 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CD27P26842 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.16■□□□□ 0.18
CD27P26842 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
CD27P26842 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CD27P26842 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.16■□□□□ 0.18
CD27P26842 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.16■□□□□ 0.18
CD27P26842 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CD27P26842 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.16■□□□□ 0.18
CD27P26842 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 MEIS3P1-201ENST00000495167 958 ntBASIC16.16■□□□□ 0.18
CD27P26842 AC093004.1-201ENST00000508850 424 ntBASIC16.16■□□□□ 0.18
CD27P26842 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.16■□□□□ 0.18
CD27P26842 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.16■□□□□ 0.18
CD27P26842 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CD27P26842 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.16■□□□□ 0.18
CD27P26842 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD27P26842 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CD27P26842 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.15■□□□□ 0.18
CD27P26842 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CD27P26842 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CD27P26842 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CD27P26842 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CD27P26842 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.15■□□□□ 0.18
CD27P26842 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.15■□□□□ 0.18
CD27P26842 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 AC007613.1-201ENST00000572811 2597 ntBASIC16.15■□□□□ 0.18
CD27P26842 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CD27P26842 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 SPDYE17-201ENST00000412399 783 ntBASIC16.15■□□□□ 0.18
CD27P26842 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.15■□□□□ 0.18
CD27P26842 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 DOC2GP-202ENST00000514950 1163 ntBASIC16.15■□□□□ 0.18
CD27P26842 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.15■□□□□ 0.18
CD27P26842 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 AC044860.1-202ENST00000559481 777 ntBASIC16.15■□□□□ 0.18
CD27P26842 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.15■□□□□ 0.18
CD27P26842 AL359881.2-201ENST00000602973 570 ntBASIC16.15■□□□□ 0.18
CD27P26842 AL008721.1-201ENST00000609964 604 ntBASIC16.15■□□□□ 0.18
CD27P26842 AL033527.5-202ENST00000641632 1098 ntBASIC16.15■□□□□ 0.18
CD27P26842 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CD27P26842 AL031731.1-201ENST00000642131 2094 ntBASIC16.15■□□□□ 0.18
CD27P26842 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CD27P26842 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CD27P26842 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CD27P26842 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CD27P26842 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD27P26842 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD27P26842 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD27P26842 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD27P26842 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD27P26842 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.14■□□□□ 0.17
CD27P26842 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
CD27P26842 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD27P26842 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD27P26842 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD27P26842 SPDYE19P-201ENST00000338590 713 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms