Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
COL8A2P25067 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
COL8A2P25067 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.04□□□□□ -0.16
COL8A2P25067 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
COL8A2P25067 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
COL8A2P25067 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.03□□□□□ -0.16
COL8A2P25067 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.03□□□□□ -0.16
COL8A2P25067 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
COL8A2P25067 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
COL8A2P25067 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 RBPMS2P1-201ENST00000437762 623 ntBASIC14.03□□□□□ -0.16
COL8A2P25067 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.03□□□□□ -0.16
COL8A2P25067 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 KRT8P23-201ENST00000560090 1207 ntBASIC14.03□□□□□ -0.16
COL8A2P25067 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.03□□□□□ -0.16
COL8A2P25067 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.03□□□□□ -0.16
COL8A2P25067 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 AC021097.1-201ENST00000607902 574 ntBASIC14.03□□□□□ -0.16
COL8A2P25067 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.03□□□□□ -0.16
COL8A2P25067 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
COL8A2P25067 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.03□□□□□ -0.16
COL8A2P25067 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 AC106886.4-201ENST00000623557 2502 ntBASIC14.03□□□□□ -0.16
COL8A2P25067 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.03□□□□□ -0.16
COL8A2P25067 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL8A2P25067 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COL8A2P25067 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL8A2P25067 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL8A2P25067 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
COL8A2P25067 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL8A2P25067 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
COL8A2P25067 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL8A2P25067 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.02□□□□□ -0.16
COL8A2P25067 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL8A2P25067 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.02□□□□□ -0.16
COL8A2P25067 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL8A2P25067 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL8A2P25067 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
COL8A2P25067 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
COL8A2P25067 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.02□□□□□ -0.17
COL8A2P25067 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.02□□□□□ -0.17
COL8A2P25067 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.02□□□□□ -0.17
COL8A2P25067 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.02□□□□□ -0.17
COL8A2P25067 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.02□□□□□ -0.17
COL8A2P25067 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.02□□□□□ -0.17
COL8A2P25067 AC013467.2-201ENST00000605472 835 ntBASIC14.02□□□□□ -0.17
COL8A2P25067 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.02□□□□□ -0.17
COL8A2P25067 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
COL8A2P25067 AC008267.7-201ENST00000624570 1194 ntBASIC14.02□□□□□ -0.17
COL8A2P25067 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COL8A2P25067 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
COL8A2P25067 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.02□□□□□ -0.17
COL8A2P25067 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
COL8A2P25067 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
COL8A2P25067 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms