Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RFX1P22670 HCG4-201ENST00000418983 998 ntBASIC18.09■□□□□ 0.49
RFX1P22670 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX1P22670 COX20P2-201ENST00000452636 358 ntBASIC18.09■□□□□ 0.49
RFX1P22670 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX1P22670 IGHV3-65-201ENST00000523210 341 ntBASIC18.09■□□□□ 0.49
RFX1P22670 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX1P22670 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.09■□□□□ 0.49
RFX1P22670 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX1P22670 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX1P22670 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX1P22670 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX1P22670 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX1P22670 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
RFX1P22670 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX1P22670 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RFX1P22670 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX1P22670 GGT3P-204ENST00000453783 1664 ntBASIC18.09■□□□□ 0.49
RFX1P22670 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.09■□□□□ 0.49
RFX1P22670 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.08■□□□□ 0.49
RFX1P22670 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFX1P22670 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
RFX1P22670 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX1P22670 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RFX1P22670 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFX1P22670 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX1P22670 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX1P22670 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
RFX1P22670 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFX1P22670 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX1P22670 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX1P22670 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.08■□□□□ 0.48
RFX1P22670 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.08■□□□□ 0.48
RFX1P22670 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.08■□□□□ 0.48
RFX1P22670 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX1P22670 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX1P22670 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.08■□□□□ 0.48
RFX1P22670 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.48
RFX1P22670 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.08■□□□□ 0.48
RFX1P22670 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.08■□□□□ 0.48
RFX1P22670 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.08■□□□□ 0.48
RFX1P22670 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.08■□□□□ 0.48
RFX1P22670 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RFX1P22670 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX1P22670 AP001350.2-201ENST00000625104 1094 ntBASIC18.08■□□□□ 0.48
RFX1P22670 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.08■□□□□ 0.48
RFX1P22670 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RFX1P22670 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.08■□□□□ 0.48
RFX1P22670 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
RFX1P22670 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFX1P22670 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX1P22670 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RFX1P22670 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX1P22670 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFX1P22670 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
RFX1P22670 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX1P22670 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX1P22670 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX1P22670 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.07■□□□□ 0.48
RFX1P22670 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX1P22670 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX1P22670 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX1P22670 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 AC087641.1-201ENST00000557561 1021 ntBASIC18.07■□□□□ 0.48
RFX1P22670 SPCS2P1-201ENST00000561636 679 ntBASIC18.07■□□□□ 0.48
RFX1P22670 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RFX1P22670 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX1P22670 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX1P22670 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.07■□□□□ 0.48
RFX1P22670 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RFX1P22670 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX1P22670 SLC22A20-204ENST00000530038 1673 ntBASIC18.06■□□□□ 0.48
RFX1P22670 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX1P22670 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX1P22670 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RFX1P22670 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.06■□□□□ 0.48
RFX1P22670 MTHFR-217ENST00000641820 1569 ntBASIC18.06■□□□□ 0.48
RFX1P22670 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX1P22670 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms