Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.9■□□□□ 0.3
NFKB1P19838 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.9■□□□□ 0.3
NFKB1P19838 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NFKB1P19838 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
NFKB1P19838 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.9■□□□□ 0.3
NFKB1P19838 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
NFKB1P19838 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NFKB1P19838 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.9■□□□□ 0.3
NFKB1P19838 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.9■□□□□ 0.3
NFKB1P19838 KRT18P2-201ENST00000447938 1258 ntBASIC16.9■□□□□ 0.3
NFKB1P19838 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.9■□□□□ 0.3
NFKB1P19838 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.9■□□□□ 0.3
NFKB1P19838 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.9■□□□□ 0.3
NFKB1P19838 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.9■□□□□ 0.3
NFKB1P19838 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.9■□□□□ 0.3
NFKB1P19838 BX640515.1-201ENST00000617215 977 ntBASIC16.9■□□□□ 0.3
NFKB1P19838 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.9■□□□□ 0.3
NFKB1P19838 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
NFKB1P19838 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.9■□□□□ 0.3
NFKB1P19838 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NFKB1P19838 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.9■□□□□ 0.3
NFKB1P19838 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
NFKB1P19838 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NFKB1P19838 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NFKB1P19838 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.89■□□□□ 0.3
NFKB1P19838 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NFKB1P19838 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
NFKB1P19838 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NFKB1P19838 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.89■□□□□ 0.3
NFKB1P19838 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
NFKB1P19838 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.89■□□□□ 0.29
NFKB1P19838 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.89■□□□□ 0.29
NFKB1P19838 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.89■□□□□ 0.29
NFKB1P19838 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.89■□□□□ 0.29
NFKB1P19838 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.89■□□□□ 0.29
NFKB1P19838 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.89■□□□□ 0.29
NFKB1P19838 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
NFKB1P19838 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.89■□□□□ 0.29
NFKB1P19838 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.89■□□□□ 0.29
NFKB1P19838 AC023141.13-201ENST00000604991 943 ntBASIC16.89■□□□□ 0.29
NFKB1P19838 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.89■□□□□ 0.29
NFKB1P19838 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NFKB1P19838 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NFKB1P19838 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NFKB1P19838 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 BCAR1-209ENST00000546196 1340 ntBASIC16.89■□□□□ 0.29
NFKB1P19838 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.89■□□□□ 0.29
NFKB1P19838 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.89■□□□□ 0.29
NFKB1P19838 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NFKB1P19838 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NFKB1P19838 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NFKB1P19838 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NFKB1P19838 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.89■□□□□ 0.29
NFKB1P19838 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NFKB1P19838 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NFKB1P19838 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.88■□□□□ 0.29
NFKB1P19838 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NFKB1P19838 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NFKB1P19838 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NFKB1P19838 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NFKB1P19838 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NFKB1P19838 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.88■□□□□ 0.29
NFKB1P19838 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NFKB1P19838 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NFKB1P19838 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NFKB1P19838 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NFKB1P19838 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NFKB1P19838 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms