Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SYN1P17600 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.88■□□□□ 0.45
SYN1P17600 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYN1P17600 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.88■□□□□ 0.45
SYN1P17600 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYN1P17600 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.88■□□□□ 0.45
SYN1P17600 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYN1P17600 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYN1P17600 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYN1P17600 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYN1P17600 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYN1P17600 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.87■□□□□ 0.45
SYN1P17600 KRT8P13-201ENST00000463294 1010 ntBASIC17.87■□□□□ 0.45
SYN1P17600 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.87■□□□□ 0.45
SYN1P17600 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.87■□□□□ 0.45
SYN1P17600 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYN1P17600 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.87■□□□□ 0.45
SYN1P17600 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.87■□□□□ 0.45
SYN1P17600 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.87■□□□□ 0.45
SYN1P17600 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.87■□□□□ 0.45
SYN1P17600 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYN1P17600 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SYN1P17600 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYN1P17600 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYN1P17600 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SYN1P17600 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SYN1P17600 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SYN1P17600 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.86■□□□□ 0.45
SYN1P17600 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.86■□□□□ 0.45
SYN1P17600 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SYN1P17600 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 AC138932.1-201ENST00000534164 6830 ntBASIC17.86■□□□□ 0.45
SYN1P17600 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SYN1P17600 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SYN1P17600 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SYN1P17600 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
SYN1P17600 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.86■□□□□ 0.45
SYN1P17600 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.86■□□□□ 0.45
SYN1P17600 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.86■□□□□ 0.45
SYN1P17600 AC106872.11-201ENST00000605838 421 ntBASIC17.86■□□□□ 0.45
SYN1P17600 AC026979.3-201ENST00000607315 403 ntBASIC17.86■□□□□ 0.45
SYN1P17600 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SYN1P17600 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.86■□□□□ 0.45
SYN1P17600 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SYN1P17600 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.86■□□□□ 0.45
SYN1P17600 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SYN1P17600 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SYN1P17600 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
SYN1P17600 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.86■□□□□ 0.45
SYN1P17600 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYN1P17600 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SYN1P17600 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SYN1P17600 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SYN1P17600 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SYN1P17600 ACTG1P3-201ENST00000431775 1114 ntBASIC17.85■□□□□ 0.45
SYN1P17600 AL162726.2-201ENST00000438986 1017 ntBASIC17.85■□□□□ 0.45
SYN1P17600 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.85■□□□□ 0.45
SYN1P17600 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYN1P17600 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.85■□□□□ 0.45
SYN1P17600 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYN1P17600 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.85■□□□□ 0.45
SYN1P17600 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.85■□□□□ 0.45
SYN1P17600 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.85■□□□□ 0.45
SYN1P17600 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.85■□□□□ 0.45
SYN1P17600 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYN1P17600 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SYN1P17600 AL365330.1-201ENST00000607459 531 ntBASIC17.85■□□□□ 0.45
SYN1P17600 AC074044.1-201ENST00000609673 707 ntBASIC17.85■□□□□ 0.45
SYN1P17600 ABALON-201ENST00000629058 1903 ntBASIC17.85■□□□□ 0.45
SYN1P17600 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYN1P17600 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYN1P17600 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
SYN1P17600 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.84■□□□□ 0.45
SYN1P17600 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms