Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.58■□□□□ 0.08
CCL4P13236 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.58■□□□□ 0.08
CCL4P13236 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.58■□□□□ 0.08
CCL4P13236 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.58■□□□□ 0.08
CCL4P13236 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCL4P13236 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.58■□□□□ 0.08
CCL4P13236 API5-211ENST00000534695 560 ntTSL 5 BASIC15.58■□□□□ 0.08
CCL4P13236 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 AL008721.1-201ENST00000609964 604 ntBASIC15.58■□□□□ 0.08
CCL4P13236 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
CCL4P13236 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CCL4P13236 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CCL4P13236 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCL4P13236 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCL4P13236 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.57■□□□□ 0.08
CCL4P13236 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.57■□□□□ 0.08
CCL4P13236 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCL4P13236 OR8S1-201ENST00000310194 1080 ntBASIC15.57■□□□□ 0.08
CCL4P13236 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCL4P13236 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CCL4P13236 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.57■□□□□ 0.08
CCL4P13236 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.57■□□□□ 0.08
CCL4P13236 AC093724.1-201ENST00000448659 1027 ntBASIC15.57■□□□□ 0.08
CCL4P13236 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.57■□□□□ 0.08
CCL4P13236 AC104794.3-201ENST00000566840 1248 ntBASIC15.57■□□□□ 0.08
CCL4P13236 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.57■□□□□ 0.08
CCL4P13236 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.57■□□□□ 0.08
CCL4P13236 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCL4P13236 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCL4P13236 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.57■□□□□ 0.08
CCL4P13236 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.57■□□□□ 0.08
CCL4P13236 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.57■□□□□ 0.08
CCL4P13236 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.57■□□□□ 0.08
CCL4P13236 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCL4P13236 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCL4P13236 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CCL4P13236 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.56■□□□□ 0.08
CCL4P13236 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CCL4P13236 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CCL4P13236 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.56■□□□□ 0.08
CCL4P13236 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 AL353779.1-201ENST00000434793 351 ntBASIC15.56■□□□□ 0.08
CCL4P13236 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.56■□□□□ 0.08
CCL4P13236 KRT17P7-201ENST00000451704 1104 ntBASIC15.56■□□□□ 0.08
CCL4P13236 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.56■□□□□ 0.08
CCL4P13236 RN7SL618P-201ENST00000477850 296 ntBASIC15.56■□□□□ 0.08
CCL4P13236 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.56■□□□□ 0.08
CCL4P13236 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.56■□□□□ 0.08
CCL4P13236 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
CCL4P13236 AL512361.1-201ENST00000554200 418 ntBASIC15.56■□□□□ 0.08
CCL4P13236 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.56■□□□□ 0.08
CCL4P13236 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.56■□□□□ 0.08
CCL4P13236 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.56■□□□□ 0.08
CCL4P13236 CU639417.3-201ENST00000624240 1404 ntBASIC15.56■□□□□ 0.08
CCL4P13236 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 AL589702.1-201ENST00000641229 1509 ntBASIC15.56■□□□□ 0.08
CCL4P13236 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCL4P13236 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CCL4P13236 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CCL4P13236 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms