Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TPM1P09493 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TPM1P09493 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM1P09493 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 AC096582.2-201ENST00000510860 516 ntBASIC18.39■□□□□ 0.53
TPM1P09493 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TPM1P09493 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.39■□□□□ 0.53
TPM1P09493 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.39■□□□□ 0.53
TPM1P09493 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM1P09493 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM1P09493 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
TPM1P09493 AC126177.1-201ENST00000547829 2218 ntBASIC18.39■□□□□ 0.53
TPM1P09493 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
TPM1P09493 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM1P09493 INTS4P1-201ENST00000438455 1935 ntBASIC18.39■□□□□ 0.53
TPM1P09493 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.39■□□□□ 0.53
TPM1P09493 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.39■□□□□ 0.53
TPM1P09493 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TPM1P09493 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM1P09493 AL161772.1-201ENST00000610494 4412 ntBASIC18.39■□□□□ 0.53
TPM1P09493 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TPM1P09493 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TPM1P09493 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPM1P09493 AC148477.5-201ENST00000625164 1645 ntBASIC18.38■□□□□ 0.53
TPM1P09493 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM1P09493 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.38■□□□□ 0.53
TPM1P09493 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TPM1P09493 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM1P09493 SPDYE21P-201ENST00000413323 827 ntBASIC18.38■□□□□ 0.53
TPM1P09493 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM1P09493 AC091607.1-201ENST00000490318 1060 ntBASIC18.38■□□□□ 0.53
TPM1P09493 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.38■□□□□ 0.53
TPM1P09493 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TPM1P09493 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.38■□□□□ 0.53
TPM1P09493 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TPM1P09493 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM1P09493 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TPM1P09493 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM1P09493 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.37■□□□□ 0.53
TPM1P09493 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TPM1P09493 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM1P09493 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TPM1P09493 AC104076.2-201ENST00000448912 469 ntBASIC18.37■□□□□ 0.53
TPM1P09493 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TPM1P09493 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.37■□□□□ 0.53
TPM1P09493 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms