Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.71■□□□□ 0.59
TPM3P06753 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM3P06753 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TPM3P06753 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM3P06753 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TPM3P06753 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TPM3P06753 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.71■□□□□ 0.59
TPM3P06753 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM3P06753 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TPM3P06753 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.71■□□□□ 0.59
TPM3P06753 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
TPM3P06753 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.71■□□□□ 0.58
TPM3P06753 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.7■□□□□ 0.58
TPM3P06753 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TPM3P06753 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.7■□□□□ 0.58
TPM3P06753 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.7■□□□□ 0.58
TPM3P06753 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.7■□□□□ 0.58
TPM3P06753 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.7■□□□□ 0.58
TPM3P06753 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.7■□□□□ 0.58
TPM3P06753 AD001527.2-201ENST00000622994 785 ntBASIC18.7■□□□□ 0.58
TPM3P06753 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TPM3P06753 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPM3P06753 AC010491.1-201ENST00000563101 2797 ntBASIC18.7■□□□□ 0.58
TPM3P06753 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.7■□□□□ 0.58
TPM3P06753 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TPM3P06753 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TPM3P06753 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TPM3P06753 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
TPM3P06753 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TPM3P06753 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.69■□□□□ 0.58
TPM3P06753 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.69■□□□□ 0.58
TPM3P06753 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.69■□□□□ 0.58
TPM3P06753 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 AK4P3-201ENST00000418260 669 ntBASIC18.69■□□□□ 0.58
TPM3P06753 ACTG1P4-201ENST00000425123 1122 ntBASIC18.69■□□□□ 0.58
TPM3P06753 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.69■□□□□ 0.58
TPM3P06753 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.69■□□□□ 0.58
TPM3P06753 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.69■□□□□ 0.58
TPM3P06753 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.69■□□□□ 0.58
TPM3P06753 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TPM3P06753 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.69■□□□□ 0.58
TPM3P06753 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.69■□□□□ 0.58
TPM3P06753 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.69■□□□□ 0.58
TPM3P06753 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TPM3P06753 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TPM3P06753 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.68■□□□□ 0.58
TPM3P06753 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.68■□□□□ 0.58
TPM3P06753 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.68■□□□□ 0.58
TPM3P06753 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TPM3P06753 AC013268.4-201ENST00000637413 2228 ntBASIC18.68■□□□□ 0.58
TPM3P06753 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TPM3P06753 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TPM3P06753 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.68■□□□□ 0.58
TPM3P06753 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TPM3P06753 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 TNRC18P2-201ENST00000417666 2714 ntBASIC18.68■□□□□ 0.58
TPM3P06753 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms