Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 LINC01144-201ENST00000626198 1710 ntBASIC16.82■□□□□ 0.28
HLA-DQB2P05538 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 AC091812.2-201ENST00000619081 385 ntBASIC16.82■□□□□ 0.28
HLA-DQB2P05538 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB2P05538 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.81■□□□□ 0.28
HLA-DQB2P05538 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 AL078644.1-201ENST00000609881 752 ntBASIC16.81■□□□□ 0.28
HLA-DQB2P05538 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB2P05538 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DQB2P05538 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB2P05538 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DQB2P05538 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB2P05538 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DQB2P05538 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms