Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.13■□□□□ 0.49
VTNP04004 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.13■□□□□ 0.49
VTNP04004 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.13■□□□□ 0.49
VTNP04004 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.13■□□□□ 0.49
VTNP04004 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VTNP04004 AC073592.8-201ENST00000624126 511 ntBASIC18.13■□□□□ 0.49
VTNP04004 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.13■□□□□ 0.49
VTNP04004 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VTNP04004 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VTNP04004 LETM1P2-201ENST00000597330 2178 ntBASIC18.13■□□□□ 0.49
VTNP04004 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VTNP04004 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.12■□□□□ 0.49
VTNP04004 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VTNP04004 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VTNP04004 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.12■□□□□ 0.49
VTNP04004 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.12■□□□□ 0.49
VTNP04004 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.12■□□□□ 0.49
VTNP04004 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.12■□□□□ 0.49
VTNP04004 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.12■□□□□ 0.49
VTNP04004 AL512638.1-201ENST00000457493 794 ntBASIC18.12■□□□□ 0.49
VTNP04004 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.12■□□□□ 0.49
VTNP04004 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.12■□□□□ 0.49
VTNP04004 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.12■□□□□ 0.49
VTNP04004 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.12■□□□□ 0.49
VTNP04004 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.12■□□□□ 0.49
VTNP04004 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
VTNP04004 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.12■□□□□ 0.49
VTNP04004 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.12■□□□□ 0.49
VTNP04004 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
VTNP04004 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.12■□□□□ 0.49
VTNP04004 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VTNP04004 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VTNP04004 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
VTNP04004 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
VTNP04004 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.11■□□□□ 0.49
VTNP04004 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.11■□□□□ 0.49
VTNP04004 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
VTNP04004 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.11■□□□□ 0.49
VTNP04004 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.11■□□□□ 0.49
VTNP04004 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.11■□□□□ 0.49
VTNP04004 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.11■□□□□ 0.49
VTNP04004 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.11■□□□□ 0.49
VTNP04004 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.11■□□□□ 0.49
VTNP04004 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.11■□□□□ 0.49
VTNP04004 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.11■□□□□ 0.49
VTNP04004 RN7SL204P-201ENST00000582831 262 ntBASIC18.11■□□□□ 0.49
VTNP04004 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 AL138828.2-201ENST00000615812 383 ntBASIC18.11■□□□□ 0.49
VTNP04004 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
VTNP04004 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.11■□□□□ 0.49
VTNP04004 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.11■□□□□ 0.49
VTNP04004 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
VTNP04004 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
VTNP04004 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VTNP04004 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms