Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MT-ND3P03897 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.01■□□□□ 0.31
MT-ND3P03897 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
MT-ND3P03897 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.01■□□□□ 0.31
MT-ND3P03897 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-ND3P03897 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MT-ND3P03897 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND3P03897 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MT-ND3P03897 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17■□□□□ 0.31
MT-ND3P03897 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 LINC00895-201ENST00000629028 1637 ntBASIC17■□□□□ 0.31
MT-ND3P03897 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MT-ND3P03897 AL031284.1-201ENST00000419297 478 ntBASIC17■□□□□ 0.31
MT-ND3P03897 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17■□□□□ 0.31
MT-ND3P03897 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
MT-ND3P03897 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND3P03897 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17■□□□□ 0.31
MT-ND3P03897 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17■□□□□ 0.31
MT-ND3P03897 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MT-ND3P03897 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17■□□□□ 0.31
MT-ND3P03897 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17■□□□□ 0.31
MT-ND3P03897 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17■□□□□ 0.31
MT-ND3P03897 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND3P03897 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
MT-ND3P03897 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND3P03897 INTS4P1-201ENST00000438455 1935 ntBASIC17■□□□□ 0.31
MT-ND3P03897 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17■□□□□ 0.31
MT-ND3P03897 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.99■□□□□ 0.31
MT-ND3P03897 DUX4L17-201ENST00000557360 1267 ntBASIC16.99■□□□□ 0.31
MT-ND3P03897 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.99■□□□□ 0.31
MT-ND3P03897 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-ND3P03897 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-ND3P03897 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-ND3P03897 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MT-ND3P03897 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MT-ND3P03897 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MT-ND3P03897 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-ND3P03897 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms